No. This is from History.com
The Inquisition was a powerful office set up within the Catholic Church to root out and punish heresy throughout Europe and the Americas. Beginning in the 12th century and continuing for hundreds of years, the Inquisition is infamous for the severity of its tortures and its persecution of Jews and Muslims. Its worst manifestation was in Spain, where the Spanish Inquisition was a dominant force for more than 200 years, resulting in some 32,000 executions.
Regardless of whether or not Alex Jones lied on the witness stand it seems very obvious to me, a casual observer with no dog in the fight, that he is being punished for heresy against the powers that be.
If the judgement had been $100 million, $1 million to each of the 100 families he offended I'd agree that the analogy is poor. But it was so over the top and you have these raving lunatics running around telling people he needs to burn in hell, that I'll stick with my analogy being appropriate.